Prepare sequences for phylogenomic analyses

Last updated: 2018/12/01

In order to perform phylogenomic anaysis, one has to prepare the protein or cds sequences for each species in the concanetated or non-concatenated format. For the concatenated format, all the protein or cds sequences from a species are concatenated to form a "super gene" for further study. This module allow the uses to prepare the concatenated or non-concatenated sequences for further analyses.

The current release contains 198 genes that are reported from 3058 chloroplast genome.

At present time, the maximal numbers of species and genes are 10 and 80 respectively.


Species (3058)


Gene Names (198)


Type of sequence


Concatenate Sequences?

No: Yes:



Last updated: January 2nd, 2019.
For questions and comments, please send email to cliu@implad.ac.cn or cliu6688@yahoo.com.

Center for Bioinformatics
Institute of Medicinal Plant Development
PeKing Union Medical College
Chinese Academy of Medical Sciences
Address: No. 151, Malianwa North Road, Haidian District, Beijing 100093, P.R.China